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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MOGS_RAT
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGERRRRA AAAEGARPLE RARGAGRRDG RAGGARGSAG GAALAVVVLA LAFGLSGRWV  60
   61 LAWLGVRRAL TLHPAPSALP PDSSSPAVAP EFFWGTYRPH VYFGMKTRSP KPLLTGLMWA 120
  121 QQGATPGTPP KLRHTCEQGD GVGPYGWEFH DGLSFGRQHI YDGALRLTTE FVKRSGGHHG 180
  181 GDWSWRVTVE PQASGTPSFP LVSLFFYVVT DGQEVLLPEV GAKGQLKFIS GHTSELGDFR 240
  241 LTLLPPTTPG DTVPKHGSYN VFWSSNPGLP LLTDMVKSHL NSWFHHRPPG ASPERYLGLP 300
  301 GSLKWEERGP SGQGQFLVQQ VTLKAPFSVE FVFESGSART GRDQASEQLV GGQLTRALES 360
  361 HAAAFKERFE RTFQLKEKGL SPEEQALGQV ALSGLLGGIG YFYGQGLVLP DTGMEGSEQK 420
  421 MDPSLFPPVP LFSGVPSRSF FPRGFLWDEG FHQLVVQRWD PHLTREALGH WLGLLNADGW 480
  481 IGREQILGDE ARARVPPEFL VQRAAHANPP TLLLPVIHML EGRAPEDLAF LRRAFPRLHA 540
  541 WFSWLHQSQA GPVPLSYRWR GRDLALPTLL NPKTLPSGLD DYPRASHPSA AERHLDLRCW 600
  601 VTLGARVLSQ LAEELGETEA AAELGPLAAS LEAAGSLDEL HWAPELGVFA DFGNHTKAVQ 660
  661 LKSRPPQGLV RVVGRPPARL QYVDALGYVS LFPLLLQLLE PSSPRLGPLL DVLADSRHLW 720
  721 SPFGLRSLSA SSLFYKQRNT EHDPPYWRGA VWLNINYLAL GALHHYGRVE GPHKVQAAKL 780
  781 YRELRANVVS NVRQQYQATG FLWEQYSDQD GRGMGCRPFQ GWTSLVLLIM AEEY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle