YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Gr59d-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLLKLCLR IAYAYGRLTG VINFKIDLKT GQALVTRGAT LISVSTHLLI FALLLYQTMR  60
   61 KSVVNVMWKY ANSLHEYVFL VIAGFRVVCV FLELVSRWSQ RRTFVRLFNS FRRLYQRNPD 120
  121 IIQYCRRSIV SKFFCVTMTE TLHIIVTLAM MRNRLSIALA LRIWAVLSLT AIINVIITQY 180
  181 YVATACVRGR YALLNKDLQA IVTESQSLVP NGGGVFVTKC CYLADRLERI AKSQSDLQEL 240
  241 VENLSTAYEG EVVCLVITYY LNMLGTSYLL FSISKYGNFG NNLLVIITLC GIVYFVFYVV 300
  301 DCWINAFNVF YLLDAHDKMV KLLNKRTLFQ PGLDHRLEMV FENFALNLVR NPLKLHMYGL 360
  361 FEFGRGTSFA VFNSLLTHSL LLIQYDVQNF

Type	Start	End	Confidence
Cytoplasmic	1	33	0.96
Transmembrane Helix	34	56	0.90
Non-Cytoplasmic	57	76	0.86
Transmembrane Helix	77	96	0.94
Cytoplasmic	97	157	0.77
Transmembrane Helix	158	183	0.83
Non-Cytoplasmic	184	251	0.51
Transmembrane Helix	252	271	0.64
Cytoplasmic	272	278	0.52
Transmembrane Helix	279	304	0.79
Non-Cytoplasmic	305	362	0.59
Transmembrane Helix	363	383	0.65
Cytoplasmic	384	390	0.51