YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FRDD_YERPE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQVPKRSDE PIFWGLFGAG GMWGAIIAPV IILLVAILLP LGAFPGDALS YERILAFCQS  60
   61 FIGRVFLLLM IILPLWCGLH RIHHAMHDLK IHVPAGKWVF YGLAAILSVV TFIGVLTL

Type	Start	End	Confidence
Cytoplasmic	1	12	0.88
Transmembrane Helix	13	39	0.86
Non-Cytoplasmic	40	59	0.71
Transmembrane Helix	60	79	0.92
Cytoplasmic	80	97	0.80
Transmembrane Helix	98	116	0.97
Non-Cytoplasmic	117	118	0.74