YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195630536, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINPNPKRSD EPVFWGLFGA GGMWGAIIAP VIVLLVGIML PLGLFPGDAL SFERVLTFAQ  60
   61 SFIGRVFLFL MIVLPLWCGL HRMHHAMHDL KIHVPAGKWV FYGLAAILTV VTAIGVITL

Type	Start	End	Confidence
Cytoplasmic	1	13	0.92
Transmembrane Helix	14	40	0.86
Non-Cytoplasmic	41	60	0.76
Transmembrane Helix	61	80	0.93
Cytoplasmic	81	98	0.85
Transmembrane Helix	99	117	0.97
Non-Cytoplasmic	118	119	0.75