YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FRDC_PROVU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKRKPYVR GMQPNWWTKL GFYRFYITRE GTCLPQLWFS LVVLFGVFAL KNGPESWAGF  60
   61 VGFLSNPILM LINIVTLIAT VFHTATWFKL APKAVNIVVK DEKLPQEPIV RGLWGLTIVV 120
  121 TVVILAVALI V

Type	Start	End	Confidence
Cytoplasmic	1	31	0.88
Transmembrane Helix	32	50	0.88
Non-Cytoplasmic	51	67	0.78
Transmembrane Helix	68	88	0.91
Cytoplasmic	89	108	0.93
Transmembrane Helix	109	130	0.92
Non-Cytoplasmic	131	131	0.98