YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FP1_MYTCO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGIKLNLCL LCIFSCDIFA LSNGNIHNVY GSAYSGASAG AYKTLPGSHP YGSKHVPVYK  60
   61 PMNKIPTPYI SKKSYPAPYK PKGYYPTKRY QPTYGSKTNY PPIYKPIAKK LSSYKAIKTT 120
  121 YPAYKAKTSY PPSYKHKITY PPTYKPKITY PPTYKQKPSY PPSYKPKTTY PPTYKPKITY 180
  181 PPTYKRKPSY TPYKPKATYP PTYKPKITYP PTYKRKPSYT PYKPKTTYPP TYKPKISYPS 240
  241 IYKPKASYVS SYKSKKTYPP TYKPKISYPP TYKPKPSYPP TYKPKVTYPP TYKPKPSYPP 300
  301 TYKPKITYPP TYKPKPSYPT PYKQKPSYPP IYKSKSSYPT SYKSKKTYPP TYKPKITYPP 360
  361 TYKPKPSYPP SYKPKKTYSP TYKPKITYPP TYKPKPSYPP SYKPKTTYPP TYKPKISYPP 420
  421 TYKPKASYVS SYKSKKTYPP TYKPKISYPP TYKPKPSYPP TYKPKITYPP TYKPKPSYPP 480
  481 TYKPKITYPP TYKRKPSYPT PYKQKPSYPP IYKSKSSYPT SYKSKKTYPP TYKPKITYPP 540
  541 TYKPKPSYPP SYKPKTTYPP TYKPKIRYPP TYKPKASYPP TYKPKITYPP TYKPKPSYPT 600
  601 PYKQKPSYPP IYKSKSSYPT AYKSKKTYPP TYKPKITYPP TYKPKPSYPP SYRPKITYPP 660
  661 TYKPKKSYPQ AYKSKGSYPP SYQPKKTYPP SYKPKKTYPP TYKPKISYPP TYKTKPSYPA 720
  721 SYKRKTSYPP TYKPKISYPS TYKAKPSYPP TYKPKPSYAS SYKPKIRYPP TYKPKPSYAS 780
  781 SYKPKIRYPP TYKPKPSYAS SYKPKIRYPP TYKPKPSYAS SYKPKITYPP TYKPKISYPP 840
  841 TYKPKITYPP TYKPKISYPP AYKPKISYPS QY

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	872	0.99