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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FOXA_SALTY
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLEMFMFAT TRMALLIGGA IGGATFPLFA QETTKNDTVI VTSPVQSGAT KLATPDIETP  60
   61 QSVSIITRQQ FEEQGATSVR QAVSYTPGVY SNQIGASNRF DYIVLRGFSD GSLDNVYLDG 120
  121 LKMMGDTNSH SSLVVDPWFL EDIEVVRGPA SVLYGRSSPG GIVALTSRKP AFDAGGEVKL 180
  181 FAGNNNQRGA AFDVTGPLDD NERVAARLSG MTRYADSQFT PLKEERYALM PSLTWRITDR 240
  241 TRLDLMAYPH RDPEGGSHSG LPYQGTVVPY NGGKISNTFF EGEDDYDKYD RRENMVGYNI 300
  301 EHLFDNGWSV RQKLRYLHTK VTLNQVYAAG WLNETALNRG YSGSGEKMSA IALDNQLDGS 360
  361 VDTGAINHRL LVGIDYQDRS NHTTGYYGAF PPIDAFNPVY GAQPDYITLY SREKHKLRQT 420
  421 GYYLQDQMSW DRWRFTLGGR YDRVSVSNID KLHDSRSDLD KNNVSTRAAL LYLFDNGVAP 480
  481 YLSYSTAFTP TSFADENGNV LEPMKGKQWE AGVKYEPPGG NSQFSAAVYR INQTNIATKE 540
  541 EPTDPYRSIG EIESKGVELE AISHLSDSVR LQAAYTYTDI RYKKSSPQEQ GKRAVYAPRN 600
  601 QASAWLSYDV KSGLLEGLTL GSGIRYVNGV TSDRLNTHTL PSYTLVDMVV GYDLSSIGLN 660
  661 GLSAQLNVNN LTDKRYVAAC NSLSYCYFGA ERSIVGSVSW AF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle