YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FMD3_NEIGO
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLQKGFTL IELMIVIAIV GILAAVALPA YQDYTARAQV SEAILLAEGQ KSAVTEYYLN  60
   61 HGKWPENNTS AGVASPPSDI KGKYVKEVKV ENGVVTATMN SSGVNKEIQG KRLSLWGRRE 120
  121 NGSVKWFCGQ PVTRAKADAD ADAAGKDTTN IDTKHLPSTC RDAASAVCIE TPPTAFYKNT 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	7	0.57
Transmembrane Helix	8	31	0.64
Non-Cytoplasmic	32	180	0.87