YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218892934, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENRLAAKL TKVDKAAILL LSLGETDAAQ VLRHMGPKEV QRVGVAMASM RNVHREQVEQ  60
   61 VMGEFVEVVG DQTSLGVGAD GYIRKMLTQA LGEDKANNLI DRILLGGSTS GLDSLKWMEP 120
  121 RAVADVIRYE HPQIQAIVVA YLDPDQAAEV LSHFDHKVRL DIVLRVSSLN TVQPSALKEL 180
  181 NLILEKQFAG NSNATRTTMG GVKRAADIMN YLDSSIEGQL MDSIREVDED LSGQIEDLMF 240
  241 VFDNLADVDD RGIQALLREV SSDVLVLALK GSDEAIREKV FKNMSKRAAE LLRDDLEAKG 300
  301 PVRVSEVEGA QKEILTIARR MAESGDIVLG GKGGEEMI

Type	Start	End	Confidence
Signal Peptide	1	28	0.96
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	338	0.99