YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FGF8B_DANRE
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKSSRLGY LFLQFMTLCF YTQMTMQSIS MPNFKHHVTE QSRLSDRMSR RLTRTYQLYS  60
   61 RTSGKHVQVL GNKRVNANAE DGDIHAKLVV ETDTFGSRVR IRGAKTGYYI CMNKKGKLIG 120
  121 RRKGRGKDCI FTEIVLENNY TALQNAKYKG WYMAFTRKGR PRKAMQTRQH QREAHFMKRL 180
  181 PRGHLLTEQK PFDLIPYPLN KRTKHHQRAS VN

Type	Start	End	Confidence
Cytoplasmic	1	7	0.54
Transmembrane Helix	8	26	0.53
Non-Cytoplasmic	27	212	0.98