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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157422798, gi...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTFLGIASF TYIYKKCDAL LSSATTELLV AAVLCVSVGL IITCFSLRGQ TLKAPQFLQM  60
   61 PFQLLMTFSP TKELFSASST DSCSRSSKKR DVKRKRATDS QCSPTEDPEV IIVGAGVLGS 120
  121 AMAAVLARDG RRVTVVGRDM KEPDRIVGEL LQPGGFRVLK DLGLEGTVEG LDAHVVNGYV 180
  181 IHDMESRTEV EIPYPQQENC IQGGRAFHHG RFIMGLRRAA LAEPNVKFVE GTVTSLEEEE 240
  241 GCVTGIQYRE KDTGMLKEVR APLTIVADGC FSKFRKNLVS GKVRVSSHFV GCIMKDSPQF 300
  301 KAHHAELVLA DPSPVLIYQI SSNETRVLVD IRGEMPRDLM QYMTDKIYPQ LPEHLKEPFM 360
  361 LALQNDRLRT MPASFLPPAP VNKQGVLLLG DAYNMRHPLT GGGMSVVLND VSIWRDLLKN 420
  421 IPDLYDNTAL LQAKKKFHWE RKSSHSFVVN VLTQALYELF AATDKSLHQL RKACFHYFKL 480
  481 GGECINGPIG LLSVLSPKPL TLIGHFFAVA LYAIYFSFKS ESWLTIPRAL VNSAAILYRA 540
  541 CAVMFPLKYS ELQYLVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle