YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FEPG_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	7	0.85
Transmembrane Helix	8	27	0.86
Non-Cytoplasmic	28	62	0.80
Transmembrane Helix	63	83	0.93
Cytoplasmic	84	92	0.73
Transmembrane Helix	93	111	0.90
Non-Cytoplasmic	112	116	0.73
Transmembrane Helix	117	138	0.93
Cytoplasmic	139	146	0.75
Transmembrane Helix	147	167	0.89
Non-Cytoplasmic	168	187	0.70
Transmembrane Helix	188	211	0.83
Cytoplasmic	212	235	0.63
Transmembrane Helix	236	263	0.80
Non-Cytoplasmic	264	275	0.51
Transmembrane Helix	276	296	0.69
Cytoplasmic	297	302	0.30
Transmembrane Helix	303	324	0.90
Non-Cytoplasmic	325	330	0.33

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYVSRRLLI TCLLLVSACV VAGIWGLRSG AVTLETSQVF AALMGDAPRS MTMVVTEWRL  60
   61 PRVLMALLIG AALGVSGAIF QSLMRNPLGS PDVMGFNTGA WSGVLVAMVL FGQDLTAIAL 120
  121 SAMVGGIVTS LLVWLLAWRN GIDTFRLIII GIGVRAMLVA FNTWLLLKAS LETALTAGLW 180
  181 NAGSLNGLTW AKTSPSAPII ILMLIAAALL VRRMRLLEMG DDTACALGVS VERSRLLMML 240
  241 VAVVLTAAAT ALAGPISFIA LVAPHIARRI SGTARWGLTQ AALCGALLLL AADLCAQQLF 300
  301 MPYQLPVGVV TVSLGGIYLI VLLIQESRKK