YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FENR2_ORYSJ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAVASQVA VSAPAGSDRG LRSSGIQGSN NISFSNKSWV GTTLAWESKA TRPRHANKVL  60
   61 CMSVQQASES KVAVKPLDLE SANEPPLNTY KPKEPYTATI VSVERIVGPK APGETCHIVI 120
  121 DHGGNVPYWE GQSYGIIPPG ENPKKPGAPH NVRLYSIAST RYGDSFDGRT TSLCVRRAVY 180
  181 YDPETGKEDP SKNGVCSNFL CNSKPGDKVK VTGPSGKIML LPEEDPNATH IMIATGTGVA 240
  241 PFRGYLRRMF MEDVPKYRFG GLAWLFLGVA NTDSLLYDEE FTSYLKQYPD NFRYDKALSR 300
  301 EQKNKNAGKM YVQDKIEEYS DEIFKLLDGG AHIYFCGLKG MMPGIQDTLK KVAEQRGESW 360
  361 EQKLSQLKKN KQWHVEVY

Type	Start	End	Confidence
Signal Peptide	1	17	0.66
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	378	0.96