YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FENR_MESCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVTAAVS FPSTKSTPLS TRTSSVITHE KINFNKVPLY YRNVSVGGKV GTIRAVASDV  60
   61 EAPVAKVEKH SKKMEEGVIV NKYKPKNPYT GRCLLNTKIT GDDAPGETWH MVFSHEGEIP 120
  121 YREGQSVGVI PEGIDKNGKP HKLRLYSIAS RPLGDFGDSK TVSLCVKRLI YTNDNGEIVK 180
  181 GVCSNFLCDL KPGSEVVLTG PVGKEMLMPK DPNATIIMLA TGTGIAPFRS FLWKMFFEKH 240
  241 DDYKFNGLAW LFLGVPTSSS LLYKEEFEKM KEKAPENFRL DFAVSREQTN EKGEKMYIQT 300
  301 RMAQYDRELW ELLKKDNTYV YMCGLKGMEK GIDDIMVSLA AEDGIDWFDY KKQLKKAEQW 360
  361 NVEVY

Type	Start	End	Confidence
Signal Peptide	1	16	0.44
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	365	0.78