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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FAD3C_RICCO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGWVLSEC GLRPLPRIYS RPRIGFTSKT TNLLKLRELP DSKSYNLCSS FKVSSWSNSK  60
   61 QSNWALNVAV PVNVSTVSGE DDREREEFNG IVNVDEGKGE FFDAGAPPPF TLADIRAAIP 120
  121 KHCWVKNPWR SMSYVLRDVV VVFGLAAVAA YFNNWVAWPL YWFCQGTMFW ALFVLGHDCG 180
  181 HGSFSNNPKL NSVVGHLLHS SILVPYHGWR ISHRTHHQNH GHVENDESWH PLSEKIFKSL 240
  241 DNVTKTLRFS LPFPMLAYPF YLWSRSPGKK GSHFHPDSGL FVPKERKDII TSTACWTAMA 300
  301 ALLVYLNFSM GPVQMLKLYG IPYWIFVMWL DFVTYLHHHG HEDKLPWYRG KAWSYLRGGL 360
  361 TTLDRDYGWI NNIHHDIGTH VIHHLFPQIP HYHLVEATEA AKPVMGKYYR EPKKSGPLPL 420
  421 HLLGSLVRSM KEDHYVSDTG DVVYYQKDPK LSGIGGEKTE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle