YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FCGR2_RAT
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.50
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSNRTVVHV LSRTLYHMLL WTAVLNLVAE SHAGLPKAVV KLEPPWIQVL KEDTVTLMCE  60
   61 GTHNTKNCST QWFHNGSSIW HQAQANYTFK ATVNDSGEYR CRMEETGISE PIHLGVISDW 120
  121 LLLQTSQLVF EEGETITLRC HSWKNKQLTK VLLFQNGKPV RYYHQSSNFS IPKANHSHSG 180
  181 NYYCKAYLGR TMHVSKPVTI TVQEPKSSSS LPVLTIVAAV AGIAVAAIVI ILVSLVYLKK 240
  241 KQVPDTPSGL EEAEKNEVEN TITYSLLKHP EAPDEESDHD YQNHI

Type	Start	End	Confidence
Signal Peptide	1	33	0.50
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	212	0.96
Transmembrane Helix	213	237	0.89
Cytoplasmic	238	285	0.95