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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0292159, NaC...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDQATFND EKAVAKHQVV AYTQRSQVKH ENRHIQLVRE YGFHPRTKAS VEDGDVLPRK  60
   61 FEPFPEHMYG KPLEEIDTFI YEETFCVVSK RFRKNYIHRF TGTKSLFLFY PWSPARRVCV 120
  121 YIATNQFFDY CVMATILFNC IFLAMTETVE EAEYIFLAIY SIEMVIKIIA KGFLLNKYTY 180
  181 LRNPWNWLDF VVITSGYATI GMEVGNLAGL RTFRVLRALK TVSIMPGLKT IINALLHSFR 240
  241 QLAEVMTLTI FCLMVFALFA LQVYMGELRN KCVRQVPTDW TNVSHTDWQI WVNDTDNWLY 300
  301 DEDELPVLCG NLTGARHCPF EYVCLCVGEN PNHGYTNFDN FMWSMLTTFQ LITLDYWENV 360
  361 YNMVLATCGP MSVSFFTVVV FFGSFYLINL MLAVVALSYE EEAEITNEER KKDLLDHRDD 420
  421 STFSFDPSVL NVKKLNKNNK KKIDSRKGVL LASYSKKKTR RKKTKGGKEG GTNGNGNGSN 480
  481 GDDNKSHSAT PSPGPSPRHS ATERPSALTM QAQKQYQQME QQHKLAKSGS GGSNNPMAPT 540
  541 PKGRISFQDS GMGVKNPNML YPSDYKGQLI ANSGQPSSNS SGVNRESSQD DSGVVDDHEE 600
  601 QDTTNDMGHV STVELALSPR EVRLIKCNGN IARIKNHNVY ALHQEFSSEV VVIDDLPDRN 660
  661 CDRCVHWCTD YESWLQFQNC LYKVVRDPLF ELAITLCIVL NTAFLAMEHH GMSESFRNAL 720
  721 DVGNKVFTSI FTFECIVKLM ALSKDFFLCG WNIFDLLIVT ASLLDIIFEL VDGLSVLRGL 780
  781 RLLRVLKLAQ SWTTMKVLLS IIISTIGALG NLTLILVIVI YIFAVIGMQL FSKDYTPEKF 840
  841 DPDPVPRWNF NDFFHSFMMI FRILCGEWIE PLWDCMRAEE EQGASTCFAI FLPTLVMGNF 900
  901 MEVGEESKLA RSIERVRDLI RKKRQERKDR KERKFAEKFQ QIVLDAQQAH AQTLSHQAAV 960
  961 GLERGDKPGV LAETKFHRLS YQESMNRPVS GSDFGFQIPL HDGLHTIVDG LEYDDTGDLP1020
 1021 EQIQLQAHPL PPTSDSMPPT YESAMMATTG GSFSSVNGNG TCQNLTPFVQ AERRLQHQIS1080
 1081 SGVSTQQYDS REEATYTESI ELLGQYNSTD TDPYANDQRS GCGSFNRGDS LQDNSSRRYG1140
 1141 SEEHDEAFLK YQKSLLTRSP SYRKSLDRLS QSSGQSQRSL LKSEEAEMRR HSSGQSLNSM1200
 1201 SIEQDELLSQ QGNLREELLN CDQKELFQFL QEEEELQKGT KLRRISNVMR SRRPSSQMGQ1260
 1261 PENETMVEHS EFDNIIQSFE KELEEIKRST TSLERKLSNL SEPSPAADEA TKAIMEHIAI1320
 1321 ITGASERSAA DEVVLPLNPY DSYDLSSVPR RSQSVSAAAQ RQSVKLKRRS LEKQRKIDED1380
 1381 FSISNEIRKI CDQIHAPFVA MEAMAVAATS ASQAQPNQSP FLRRKVDPFT VQFDRFKRLS1440
 1441 LIERVEEVPE EEKPISTLRI ESEKMPRKFL HGPDQLRLDS LSLKSTNSYE NLLIQKQKLG1500
 1501 MATPPAVPAT PPTSLKSSIE PPTLAQISSL KTTPPLAALT EHQQHFHATS IQAAPTPAHT1560
 1561 HAHSQAHAHS MAGQRRRMEH PQSTLDKAAS FQSARTESHS SGAADASSAL ALAMAQKTEQ1620
 1621 SQSTAPDATQ KPSAFTRLTE KPWHCLVSYV DDLTVGGRRN SQGAYNDPMT FPSYGATKAA1680
 1681 KVPDDCFPQK CYDHFYFRCP WFMSCMDTQS AKHWTRVRTA VLTVVDTPAF EWFVLVLIFA1740
 1741 SSITLCFEDI NLDKNKTLKR VLYWINFSFC LIFVVEMILK WLALGFSKYF TSFWTILDFI1800
 1801 IVFVSVFSLL IEENENLKVL RSLRTLRALR PLRAISRWQG MRIVVNALMY AIPSIFNVLL1860
 1861 VCLVFWLIFS IMGVQFFGGK FFKCVNEMGE LLPITEVNDK WDCIEQNYTW INSKITFDHV1920
 1921 GMGYLALLQV ATFEGWMEVM ADAVDARGVD LQPQREANLY AYIYFVIFIV CGSFFTLNLF1980
 1981 IGVIIDNFNM LKKKYEGGVL EMFLTESQKH YYTAMKKLGR KKPQKVIKRP INHFLAMFYD2040
 2041 LSNSRRFEIA IFVLIFLNML TMGIEHYDQP HAVFFILEVS NAFFTTVFGL EAIVKIVGLR2100
 2101 YHYFTVPWNV FDFLLVLASI FGILMEDIMI DLPISPTLLR VVRVFRIGRI LRLIKAAKGI2160
 2161 RKLLFALVVS LPALFNIGAL LGLITFIYAI LGMSLFGNVK LQGALDDMVN FQTFGRSMQL2220
 2221 LFRLMTSAGW NDVLESLMIQ PPDCDPFIHG HTNGNCGHPL LAITYFTSFI IISYMIVINM2280
 2281 YIAIILENFN QAHQEEEIGI VEDDLEMFYI RWSKYDPHAT QFIHFSQLSD FIASLDPPLG2340
 2341 ISKPNNVALV SFNLPISKGN KIHCLDILHA LVKHVLGHVE ETDNFKQLQE QMDVKFKKQF2400
 2401 PTRKELEIVS STRIWKRQEK AAKTIQTGWK EYLRRKREKE RSNSGDSATQ TSSPGGWQSK2460
 2461 LSALNFFHLQ VSRRGTACSS RASSRKSSRA SDASDLSELA GPWLNLPLML VSGADEVVKD2520
 2521 IKQQNDELGK RGSIFVEAPR ASRRRSFYNF FLRHQDAVDD SLTSPSVHRK TAMNNTTNTT2580
 2581 SNSASTSGTA SSTATAPATG CGPAATSASD SDRHQAVGGG SAPSRKRASS FIRKKPPLER2640
 2641 GLSAQSALRV NKNAFVSEAS APEVIVTRPS PEQQTHPHSL SLRPDNATLV HVLVHRESEE2700
 2701 YKEEDESSPS VSGNGNGFGV GLDMLSKQPP PQIRITTGSV ESSMDTCAMP TVQIMVDSPK2760
 2761 DPPRGDFSSA PIDDVGAPID VNVQGDTSQV FYDYNPEKAT DDQGNGQDET AQFESLPDRQ2820
 2821 R

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