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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG34372-PC
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTRSRSRKA TDTRGFGFSF GQKDTARGLK SPPGLWAQRS HTKQNVSSMI FKTTGRSVQE  60
   61 DVNLLHASVL SMVEFDDDIF AAGNCFDWNE HPAQPGLFCP FAYRLPPPNL GAVFAKDLAM 120
  121 EYHYLGNTSE WFFLARKNAE KVIARNEQYL KSFHLYSNRT EERIEDDTLA VKYEDGRWSK 180
  181 PYYDCGGGNI WMLTYTVPFF GYENGTYHFK GTSGIDIDLR RVDIDQCPQR HTPGTKRPLN 240
  241 IFAGTDKCKQ RTTMCEAIMG LGFRRGSYKC LCRKGFYFPD IVSQHKFFNG SLLEEEYEKL 300
  301 MLGKNSTYNS NSEYECLPCA EGCDSCEDSS PCIAALNWPM RTSILALACI VIGLLPPAAW 360
  361 FTFRYQQVKV VRAASPALLR VIALGAFFIY CTNIVMYPNP NLYTCTARIW LREIGFSLTY 420
  421 GALMLKTWRI SVIFRVRSAK AVKITDAALL KRLGIICGAI GTCLLVRTLV SPPDVVVGRT 480
  481 ADDLKAFLCK TDWWDYTFTS MEVLFLAWGV RLCIMVRKAP SEFNESRFIS MAIYNEFLLT 540
  541 CFLNVSMLFL QSPANPDLLY IIFFCHTQLT VTLLLALIFG SKVYIVLRSG KSHQENIGMG 600
  601 TKASGAKFNF RPQVRTFANP SSVTTSTVPV AAETKLSDQE ALEEIRQLSM QLQRIQEMAP 660
  661 PKGVAVMTIS SLLDGLKTPG GLMVVAAAAG ATAQGHSAAN RQSALPLLAL NVEMQKYSQQ 720
  721 NNNSNGGRGS GRTSIPTMVL ETPPSSTPPS AAYEERAVNT ELSGDDFREQ LLRRTADGHI 780
  781 ICSRCLDASK EHYYCCPPRS ACDHLGSPKE EGSLSFANIK LECMCSQSED LDQDVGQRQR 840
  841 RPTVRTAATN TPPTSCKRAP RNLLEAELSI SYQICDNCRS KYKLTGRRRS GSYSQAQENP 900
  901 QLGQQPAGQL PIQSRSTELL DRTTAAEVET EVEARTKAAH STDDIVLYSS APEELAAQLA 960
  961 EPVAAPSLGN VSSNSNNSTS GSGGTTRPKR PDKLVLDLND RSKYTKEVSV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle