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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG10505-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDASKQSSPK RESNPFIKAN IISKWLFLWM HSVFRKGRRE ELDASKLYEH LPSFDSESLT  60
   61 RNLQPHWEKE SKKKNPSLMR LIFKVYGWQF VPVCILYSLL EMAIHSFQPL LLGGLISYFA 120
  121 YGQTTVTKES AYLYAMGIVL CSLVTSLVFH PFMFYVFAVG TRVRLACAGL VYRKCLRASA 180
  181 SSGEGLGGQA ISVMSIDLSQ FDLTFYFFHD LWKGPVEACI FGYLMTRQVG WTSLIGIAFI 240
  241 VILIPLQAWA AKASASFGTR SAKHRDARVK LMNEIIGAIQ VIKMYAWEKS FGRLIAAVRQ 300
  301 SEVKAIRGSM SIYAALQCTN MISKISLFLS LVAYVYVGDL VTAKKVFILS SYYGLLNDSL 360
  361 LHYWPMAITT WAQTLVSARR VVEFLLQVEK PTEESCCRDN PGLELDAEKP KPAQSGRLHC 420
  421 VQSETKCLSF RKVSASWDKP SIKQPRKPHI EGISFHINAG QFVGIVGNVG SGKSTLLHAI 480
  481 LGEIELMQGR VEVHGRISYA AQQPWVFQGS IRENILFVEQ YEEKRYRAVV HACQLDRDLE 540
  541 LLPRGDATVV GERGISLSGG QKARIALARA VYRQADIYLF DDPLAAVDAQ VGKLLMDKCF 600
  601 HRLLDGKMRI LVTHHVQLLK SVDQLLLLEG GKLTQQGSYE ELKDVITHHA ALDLEAIEAD 660
  661 KQQVKRVLSQ VDRTSKQLSK GEEKDPATIQ DENGNAEQQL QGAVSYDTYK AYFRALGAPF 720
  721 LVCLVLSMFV LARGCQAVMD IFISRWATWE EDRGYDSVDD YEATRTKMVI WYTVLLLLTL 780
  781 ALFLLRTFGF FFMCLRISLT LHDQLYHGII RAWMYFFNAN PSGRVLNRFS SDIQNVDVNL 840
  841 PQAMMDSLQF LVDVVAVLVI VAIANYWLLI PAAIMVILLY FCRALYIGAS RSLKRIESLT 900
  901 RSPIYSHTNQ TFHGHSTIRS MDAMPQLEQT FHGHQNTNSS ALFLYVSANR AFSFWTDLIC 960
  961 VIYILAVTFS FLVINQSFYS GDVGLAITQS MTLVIMCQWG MRQTAEMENN MTSVERVLEY1020
 1021 AQTPSEPPLE SPKSVNLAAE WPQAGHLRFQ DLRMRYSPGD EDILRGLNFE SQPMEKIGIV1080
 1081 GRTGAGKSSI IQALFRLALN EGTIEIDGLD IGKLGLHDLR SRISIIPQDP VLFSGTLRFN1140
 1141 LDPFDEKSDE SLWSALDDVK LKKHVASLEG GLSCRMQDGG SNFSMGQRQL VCLARAILRQ1200
 1201 NRVLVMDEAT ANVDTETDIL IQETIQTKFA ECTVLTIAHR LHTVMDNDSV LVMDAGQIVE1260
 1261 FGAPHKLLQR KDGALLKLVN QNDATTVKFL KRIASESYMR RNRRDSLTIS EE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle