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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG34396-PD
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQPMDARQQ QRHRRRLGRS HREPTPVTGD ALPQDDASPD ALPDPSPQMV RMQIRPPGSM  60
   61 SAHESKILRK RDKSFASSSA RSQSQPREAE KLSSPDANHL IKHRSLSSPR HKEESSESEL 120
  121 TTGSSSQQQR PIPNLGQTQD TLSRLEQNLQ RFEDERRRFE AEKRLFEREK REHKMRHRQQ 180
  181 LDNEERKRLL QSYRKLSDRI QLPQDEEERR RLIHSLRLQR HEAPKTRGRN RSSGYDESST 240
  241 QFSSSDADAT EETHPRPRAP KIPQGFVAAP IRGAPPPPPS ASTAPKPPER LSVSRNNSLS 300
  301 PVRPQRRSKT PEQREEILRK HEYLEVGESR DEVIKPRISE AEQQSELMQK YMEAAERAAK 360
  361 AEAALAEQIL TAEGVRRSHS LRLADKEEKP QKRSSSLERP LRPKRSGSLE RKEQVTQELL 420
  421 EGTTTNEADT EPKSLGDQPL LPEESISEAK PKVTLWQRLK NLFRRKKKIQ AKGEDVTDLS 480
  481 TELPLEKLAS RGLLYSFSLE ARHEWKRLKL DYPQKVKELR QLRNRCIAYL ICMAMLLGFG 540
  541 GLLFRYTEGA AENIYKCEVR KVKRDFIDRL WDVSHNMREE DWKSLARQKL RSFEDELNNL 600
  601 AELGLRRYPG QKSWNFVNCF IFCWTVITTI GYGHITPKTG MGRSLTIVYA IIGIPMFLIV 660
  661 LADLGKLFTR CVKFLWVYVR RMYYTRSCRR IRKQQQIRSA MTGFNTMYDM AIRRPSMFFS 720
  721 NSAPENDEES QADAEAARSV GTSHPETPTS PYPETFEVDD EFNLPVSVAS LLLITYILLG 780
  781 SFGFLMMEPS WTPLDAFYYV FISMSTIGFG DLVPSNPFYV MVSMIYLMFG LALTSMFINV 840
  841 VQIKLSDHFK MASAKVGATI GMNMTSELGD EGGSQVKTPS ELASVHGSRL DRIEEDGQEA 900
  901 NGNGHSPVPP LTSILRAPRP LSPASNGVDA NGVGADAVGA GDVTPPPLLP RRQVSVDPQP 960
  961 PAEGENKKKK KHRFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle