YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG12824-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKPDSKAGI ICSGAASICL AIAYLIIFAN LRELSYAFGV HIASMQIISS AVLIGGAIKE  60
   61 RHKLFVPWMI TTAMFLYLMG YSSIVLLAMG DWLIVMFCAA PMIGCLGMAF YAVQKAFRRM 120
  121 RKDGLPPKYA DMQVKSILVN PI

Type	Start	End	Confidence
Cytoplasmic	1	7	0.97
Transmembrane Helix	8	28	0.95
Non-Cytoplasmic	29	36	0.78
Transmembrane Helix	37	57	0.95
Cytoplasmic	58	63	0.91
Transmembrane Helix	64	85	0.92
Non-Cytoplasmic	86	91	0.78
Transmembrane Helix	92	113	0.94
Cytoplasmic	114	142	0.99