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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kuz-PD
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.42
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKCAFNIV FVSIIFIIIV NGYAKDISGV KRGECSVSNA ENVLHKNGVR CHERLNEYIS  60
   61 HYETLNYDHE HIRASHNRAR RSVTKDQYVH LKFASHGRDF HLRLKRDLNT FSNKLDFYDS 120
  121 KGPIDVSTDH IYEGEVIGDR NSYVFGSIHN GVFEGKIITE RDAYYVEHAK HYFPTNRTAT 180
  181 TTPPSTSTTS SATTATKSTQ PTRPLAKSNT STTAVNSKTE NFIKKIAEST TTSQQLPEYT 240
  241 ESSSSSTTTF PPTTEYFEDE KERNAEDELD FHSIIYKESH VEDAYENVRE GHVAGCGITD 300
  301 EVSQWMENIQ NSAVEELPEP MSKDYQKLHR KQLHKKSAPQ QQQQPHPPKK YISGDEDFKY 360
  361 PHQKYTKEAN FAEGAFYDPS TGRRLGSSAN VADWHQLVHE RVRRATDNGA GDRGSSGGSG 420
  421 RGREDNKNTC SLYIQTDPLI WRHIREGIAD HDRGRKYEVD EKTREEITSL IAHHVTAVNY 480
  481 IYRNTKFDGR TEHRNIRFEV QRIKIDDDSA CRNSYNGPHN AFCNEHMDVS NFLNLHSLED 540
  541 HSDFCLAYVF TYRDFTGGTL GLAWVASASG ASGGICEKYK TYTETVGGQY QSTKRSLNTG 600
  601 IITFVNYNSR VPPKVSQLTL AHEIGHNFGS PHDYPQECRP GGLNGNYIMF ASATSGDRPN 660
  661 NSKFSPCSIR NISNVLDVLV GNTKRDCFKA SEGAFCGNKI VESGEECDCG FNEEECKDKC 720
  721 CYPRLISEYD QSLNSSAKGC TRRAKTQCSP SQGPCCLSNS CTFVPTSYHQ KCKEETECSW 780
  781 SSTCNGTTAE CPEPRHRDDK TMCNNGTALC IRGECSGSPC LLWNMTKCFL TSTTLPHVSK 840
  841 RKLCDLACQD GNDTSTCRST SEFADKYNIQ KGGISLQPGS PCDNFQGYCD VFLKCRAVDA 900
  901 DGPLLRLKNL LLNRKTLQTV AEWIVDNWYL VVLMGVAFIV VMGSFIKCCA VHTPSSNPKK 960
  961 RRARRISETL RAPMNTLRRM QRHPNQRGAG PRSIPPPAHE AQHYSRGGDG RGGGGGGGGR1020
 1021 HGGSRSHHQQ HPHDWDRHQG GHSIVPLPTG GSHSSRNSAA NQARRSDGRG PRSTSSGRPQ1080
 1081 AIASGSGAAS GAARSHGGYG AEQAIPGSIG GGVQAAISSG GVVARAQLPL PLPPPNGQQQ1140
 1141 MQQQQQLQLQ QPAISPQQQP QQAFYTPKEL PPRNKSRSSR TNNTSNTTTT TNSSTAAAGS1200
 1201 GSVSGPGSGA GSSSKSKSGK SAKAKDSKSQ KSQQANNSRS SSKEKGVKPV RRNIVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle