YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FATB_CUPHO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVATAASSAF FPLPSADTSS RPGKLGNKPS SLSPLKPKST PNGGLQVKAN ASAPPKINGS  60
   61 PVGLKSGGLK TQEDAHSAPP PRTFINQLPD WSMLLAAITT VFLAAEKQWM MLDWKPKRPD 120
  121 MLVDPFGLGS IVQDGLVFRQ NFSIRSYEIG ADRTASIETV MNHLQETALN HVKIAGLSND 180
  181 GFGRTPEMYK RDLIWVVAKM QVMVNRYPTW GDTVEVNTWV AKSGKNGMRR DWLISDCNTG 240
  241 EILTRASSVW VMMNQKTRRL SKIPDEVRNE IEPHFVDSPP VIEDDDRKLP KLDEKTADSI 300
  301 RKGLTPRWND LDVNQHVNNV KYIGWILEST PPEVLETQEL CSLTLEYRRE CGRESVLESL 360
  361 TAMDPSGGGY GSQFQHLLRL EDGGEIVKGR TEWRPKNGVI NGVVPTGESS PGDYS

Type	Start	End	Confidence
Signal Peptide	1	18	0.85
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	415	0.98