YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FABH_CLOAB
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSVEIIGTG SYVPEKIVTN EDMSKIVDTS DEWISSRTGI KERRISINEN TSDLGAKAAL  60
   61 RAIEDSNIKP EEIDLIIVAT TSPDSYTPSV ACIVQEKIGA KNAACFDLNA ACTGFIFALN 120
  121 TASQFIKTGE YKTALVVGTE VLSKILDWQD RGTCVLFGDG AGAVIIRGGD ENGIIKACLG 180
  181 SDGTGKDFLH CPATNVINPF SDEKGLASSK ISMNGREVFK FAVKVMVSSV KKVIEDSGLN 240
  241 IEDIDYIVPH QANIRIIEFA AKKLGLSMDK FFINLQNYGN TSGATIPLAI DEMNKKGLLK 300
  301 RGAKIVVVGF GGGLTWGSMV LKWTK

Type	Start	End	Confidence
Cytoplasmic	1	301	0.55
Transmembrane Helix	302	320	0.61
Non-Cytoplasmic	321	325	0.72