YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5021-PC
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATVRNVP LLDDDTIPFG EEDEMRDPSR AGQKYTHPYV TFFHLFFRGA AILIYMFCGW  60
   61 FSDSFITSFV FVVLFLSADF WTVKNISGRL LVGLRWWNYV DDDGVSHWVF ESKNSESYQS 120
  121 RVNKNEQRIF WLGLILCPVF WGLFFLFALF GLKFKWLLLV MIAIALNAAN LYGYVKCNYG 180
  181 ANKDLNSAAT DFVKTQFFKN AVDIMTRPSG APPPTNVRPT GVV

Type	Start	End	Confidence
Cytoplasmic	1	34	0.97
Transmembrane Helix	35	58	0.84
Non-Cytoplasmic	59	64	0.76
Transmembrane Helix	65	83	0.94
Cytoplasmic	84	128	0.95
Transmembrane Helix	129	150	0.94
Non-Cytoplasmic	151	155	0.80
Transmembrane Helix	156	175	0.88
Cytoplasmic	176	223	0.92