YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	F16P1_BRANA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAGATPS SHLLLSSSRH VAASPQPRIL FPSLSGKRVA VGKNHHATGV RCMAVAADAT  60
   61 AETKPAAKKK SGYELQTLTS WLLRQEMKGE IDTELTIVMS SIAMACKQIA SLVQRAGISN 120
  121 LTGVQGAVNI QGEDQKKLDV VSNEVFSNCL RSSGRTGIIA SEEEDVPVAV EESYSGNYVV 180
  181 VFDPLDGSSN IDAAVSTGSI FGIYSPNDEC LPDSDDTSAL GSEEERCIVN VCQPGNNLLA 240
  241 AGYCMYSSSV IFVLTLGKGV FAFTLDPMYG EFVLTQENIE IPKAGKIYSF NEGNYQMWDE 300
  301 NLKKYIDDLK DPGPSGKPYS ARYIGSLVGD FHRTLLYGGI YGYPRDAKSK NGKLRLLYEC 360
  361 APMSFIVEQA GGKGSDGHHR VLDIQPTEIH QRVPLYIGSK EEVEKLEKYL A

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	411	0.98