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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30259398, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSILTIVII VVSSILVLLM IELVIRNRSY KDIEALEQWK QEIKDKPVAD ELKRVKDLNM  60
   61 TGQTEELFGK WREEWDEIVS TTIPKADKDL AQARKFASQF SFRKAKHAMN ESISGLDDAD 120
  121 NRITDILNEL QQLLESHEKN SSEIEGLRDT YRSMKKSVLA HRHMYGAAEQ KIEEMLDAES 180
  181 EKFKTFEEAT NNGDYLKARE IVISLEEGLA DLEIIIHQIP DLLVECQATL PVQLEDLLHG 240
  241 HNDMVRQGYV LDYLEVPKEV RDMTKQLQTC LIDIQELHIT EAAEKVENLK TRLDGFYDQL 300
  301 EQEVHARHYV EQKTLSVYED LEEIRTETIE TKAETQLVKQ SYQLQDKDIE SQKVIEKQMH 360
  361 ILTKRFEMLQ LRVAEQDIAF SIIREELEEI YEQCETLKVL HAEYKEMLQT MRKEEFEARE 420
  421 KLQEMRNTIF ETKRFMQKSN LPGLPESIME DLKRGQMAMQ AVYEQLEVKP LNMNAVNSSL 480
  481 EEAYTTVNGV AEMTEELIGQ AYLVEKLIQY GNRYRSHDEN LAESLNYAEK LFREYQYDAA 540
  541 LEQAASVLEQ LEPGVVQKIA EYVDNEQTLS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle