YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXUT_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	45	0.93
Transmembrane Helix	46	66	0.93
Non-Cytoplasmic	67	89	0.86
Transmembrane Helix	90	109	0.84
Cytoplasmic	110	115	0.76
Transmembrane Helix	116	136	0.90
Non-Cytoplasmic	137	141	0.64
Transmembrane Helix	142	162	0.81
Cytoplasmic	163	175	0.83
Transmembrane Helix	176	198	0.91
Non-Cytoplasmic	199	204	0.76
Transmembrane Helix	205	225	0.95
Cytoplasmic	226	271	0.97
Transmembrane Helix	272	293	0.81
Non-Cytoplasmic	294	307	0.76
Transmembrane Helix	308	329	0.90
Cytoplasmic	330	338	0.86
Transmembrane Helix	339	362	0.83
Non-Cytoplasmic	363	366	0.78
Transmembrane Helix	367	389	0.90
Cytoplasmic	390	401	0.78
Transmembrane Helix	402	425	0.86
Non-Cytoplasmic	426	430	0.74
Transmembrane Helix	431	452	0.91
Cytoplasmic	453	472	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFGACRFF FGYPVVTNIF SLWRDDGRAS CGYNKTMRFY MRKIKGLRWY MIALVTLGTV  60
   61 LGYLTRNTVA AAAPTLMEEL NISTQQYSYI IAAYSAAYTV MQPVAGYVLD VLGTKIGYAM 120
  121 FAVLWAVFCG ATALAGSWGG LAVARGAVGA AEAAMIPAGL KASSEWFPAK ERSIAVGYFN 180
  181 VGSSIGAMIA PPLVVWAIVM HSWQMAFIIS GALSFIWAMA WLIFYKHPRD QKHLTDEERD 240
  241 YIINGQEAQH QVSTAKKMSV GQILRNRQFW GIALPRFLAE PAWGTFNAWI PLFMFKVYGF 300
  301 NLKEIAMFAW MPMLFADLGC ILGGYLPPLF QRWFGVNLIV SRKMVVTLGA VLMIGPGMIG 360
  361 LFTNPYVAIM LLCIGGFAHQ ALSGALITLS SDVFGRNEVA TANGLTGMSA WLASTLFALV 420
  421 VGALADTIGF SPLFAVLAVF DLLGALVIWT VLQNKPAIEV AQETHNDPAP QH