YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EXGA_ASPFN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLLLCIVP YCWSSRLDPR ASSFDYNGEK VRGVNLGGWL VLEPWITPSI FDAAGAEAVD  60
   61 EWSLTKILGK EEAEARLSAH WKSFVSAGDF QRMADAGLNH VRIPIGYWAL GPLEGDPYVD 120
  121 GQLEYLDKAV EWAGAAGLKV LIDLHGAPGS QNGFDNSGRR GAIQWQQGDT VEQTLDAFDL 180
  181 LAERYLGSDT VAAIEAINEP NIPGGVDQGK LQEYYGSVYG IVNKYNAGTS VVYGDGFLPV 240
  241 ESWNGFKTEG SKVVMDTHHY HMFDNGLIAM DIDSHIDAVC QFAHQHLEAS DKPVIVGEWT 300
  301 GAVTDCAKYL NGKGNGARYD GSYAADKAIG DCSSLATGFV SKLSDEERSD MRRFIEAQLD 360
  361 AFELKSGWVF WTWKTEGAPG WDMSDLLEAG VFPTSPDDRE FPKQC

Type	Start	End	Confidence
Signal Peptide	1	14	0.76
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	405	0.99