YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EUTG_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNELQTALF QAFDTLNLQR VKTFSVPPVT LCGPGSVSSC GQQAQTRGLK HLFVMADSFL  60
   61 HQAGMTAGLT RSLTVKGIAM TLWPCPVGEP CITDVCAAVA QLRESGCDGV IAFGGGSVLD 120
  121 AAKAVTLLVT NPDSTLAEMS ETSVLQPRLP LIAIPTTAGT GSETTNVTVI IDAVSGRKQV 180
  181 LAHASLMPDV AILDAALTEG VPSHVTAMTG IDALTHAIEA YSALNATPFT DSLAIGAIAM 240
  241 IGKSLPKAVG YGHDLAARES MLLASCMAGM AFSSAGLGLC HAMAHQPGAA LHIPHGLANA 300
  301 MLLPTVMEFN RMVCRERFSQ IGRALRTKKS DDRDAINAVS ELIAEVGIGK RLGDVGATSA 360
  361 HYGAWAQAAL EDICLRSNPR TASLEQIVGL YAAAQ

Type	Start	End	Confidence
Cytoplasmic	1	261	0.71
Transmembrane Helix	262	284	0.87
Non-Cytoplasmic	285	290	0.80
Transmembrane Helix	291	313	0.76
Cytoplasmic	314	395	0.89