YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145411509
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENCYCIEPQ WPADELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFTMHS RTVAVVMTTA KVLTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA 180
  181 LWMPTRTGLE LQLSYTLHQQ NPVGYTVPIN LPVISQVFSS NRALKISPNS PVASLRPRAG 240
  241 RYVAGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWRV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNVAL DLARREAETA IRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLINDVL DLSRLEDGSL QLDIGTFNLH 420
  421 AVFKEVLNLI KPVTLVKKLS LTLHLGPDLP VFAVGDEKRL MQAILNVVGN AVKFSKEGSI 480
  481 SISAIVAKSE TFREIRVPDF HPVPSDSHFY LRVQVKDTGS GISPQDIPKL FTKFAQTTVG 540
  541 PRNSGGSGLG LAICKRFVNL MEGHIWLESE GLGKGCTATF IVKLGIADQS NESKLPYTSK 600
  601 IHENSIHTSF PGLKVLVMDD NGVSRSVTKG LLVHLGCEVT TAGSIEEFLR VVSQEHKVVF 660
  661 MDICTPGVDG YELAIRIREK FAKCHERPFM VVLTGNSDKV TKESCLRAGM DGLILKPVSI 720
  721 DKMRSVLSEL IERRVLFETS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle