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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ETFD_RAT
Protein type: Transmembrane
Type Confidence: 0.44
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVRLTKLSC PAYQWFHALK IKKCLPLCAP RCSSTSAVPQ ITTHYTIHPR EKDKRWEGVN  60
   61 MERFAEEADV VIVGAGPAGL SAAIRLKQLA AEQEKDIRVC LVEKAAQIGA HTLSGACLDP 120
  121 AAFKELFPDW KEKGAPLNTP VTEDRFAILT EKHRIPVPIL PGLPMNNHGN YIVRLGHLVS 180
  181 WMGEQAEALG VEVYPGYAAA EVLYHEDGSV KGIATNDVGI QKDGAPKTTF ERGLELHAKV 240
  241 TIFAEGCHGH LAKQFYKKFD LRASCDAQTY GIGLKELWVI DEKKWKPGRV DHTVGWPLDR 300
  301 HTYGGSFLYH LNEGEPLVAV GFVVGLDYQN PYLSPFREFQ RWKHHPSIRP TLEGGKRIAY 360
  361 GARALNEGGL QSIPKLTFPG GLLIGCSPGF MNVPKIKGTH TAMKSGSLAA EAIFKQLTSE 420
  421 NLQSKTAGLH VTEYEDNLKQ SWVWKELHAV RNIRPSCHGI LGVYGGMIYT GIFYWILRGM 480
  481 EPWTLKHKGS DSEQLKPAKD CTPIEYPKPD GQISFDLLSS VALSGTNHEH DQPAHLTLKD 540
  541 DSIPVNRNLS IYDGPEQRFC PAGVYEFVPL EQGDGFRLQI NAQNCVHCKT CDIKDPSQNI 600
  601 NWVVPEGGGG PAYNGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle