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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EPD1_CANMA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.68
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNSLFPSI LAAATFVTSA AAEDLPPIEI VGNKFFYSNN GSQFYIKGIA YQQNNLDSNS  60
   61 TFVDPLADAD NCKRDIPYLE QVDTNVIRVY ALDVTQDHTE CMQMLQDAGI YIIADLSQPD 120
  121 ESINRNDPQW NLDLFERYTS VVDKFHNYTN VLGFFAGNEV TNNVSNTDAS AFVKAAIRDT 180
  181 KAYIKAKGYR TIPVGYSAND DSDIRVSLAR YFACGDEDES ADFFGMNMYE WCGSSSFKAS 240
  241 GYESATDDYK NLGIPIFFSE YGCNEVTPRK FQEVGTLFGS DMTDVWSGGI VYMYLQEENN 300
  301 YGLVSVSGSS VSTLQDFNSY KSEILDISPS SVQASAESAS GVSRTSCPTN TDNWEASTEL 360
  361 PPTPDKDICD CMSSSLKCVV ADNVSTDDYS DLFDYVCAKI DCSGINANAT TGDYGAYSPC 420
  421 GAKDKLSFVL NLYYEEQNES KSACDFSGSA SLQSASTASS CAAYLSSAGV SGLGTVQGSV 480
  481 RTDTSEATTD SGSGSSNSGS ASSSKSTSSS TSSGSSGSKS AATAVTVTTL TKIAAVGVSI 540
  541 IVGFGLITM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle