YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	END4_SHIF8
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYIGAHVSA AGGLANAAIR AAEIDATAFA LFTKNQRQWR AAPLTTQTID EFKAACEKYH  60
   61 YTSAQILPHD SYLINLGHPV TEALEKSRDA FIDEMQRCEQ LGLSLLNFHP GSHLMQISEE 120
  121 DCLARIAESI NIALDKTQGV TAVIENTAGQ GSNLGFKFEH LAAIIDGVED KSRVGVCIDT 180
  181 CHAFAAGYDL RTPAECEKTF ADFARIVGFK YLRGMHLNDA KSTFGSRVDR HHSLGEGNIG 240
  241 HDAFRWIMQN DRFDGIPLIL ETINPDIWAE EIAWLKAQQT EKAVA

Type	Start	End	Confidence
Signal Peptide	1	17	0.90
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	285	0.99