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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1835838
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSTYKRATL DEEDLVDSLS EGEVYPNGLQ VNFRNFRSSQ RCWATRTQVE KRLIVLVALL  60
   61 AAGLVACLTA LGIQYRTRTP PVCLSEACVS VTSSILNSMN PTVDPCQDFF SYACGGWIKA 120
  121 NPVPDGHSRW GAFSNLWEHN QAIIKHLLEN STASVSEAER KAQVYYRACM NETRIEELRA 180
  181 KPLMELIEKL GGWNITGPWA KDNFQDTLQV VTAHYRTSPF FSVYVSADSK NSNRNVIHVD 240
  241 QSGLGLPSRD YYLNKTENEK VLNGYLNYMV QLGKLLGGGD ENAIRAQMQQ ILDFETALAN 300
  301 ITIPQEKRRD EELIYHKVTA AELQTLAPAI NWLPFLNTIF YPVEINESEP IVVYDKEYLE 360
  361 QVSTLINTTD KCLLNNYMIW NLVRKTSSFL DQRFQDADEK FMEVMYGTKK TCLPRWKFCV 420
  421 SDTENNLGFG LGPMFVKATF AEDSKNIASE IILEIKKAFE ESLSTLKWMD EDTRKSAKEK 480
  481 ADAIYNMIGY PNFIMDPKEL DKVFNDYTAV PDLYFENAMR FFNFSWRVTA EQLRKAPNRD 540
  541 QWSMTPPMVN AYYSPTKNEI VFPAGILPAP FYTRSSPKAL NFGGIGVVVG HELTHAFDDQ 600
  601 GREYDKDGNL RPWWKNSSVE AFKQQTECMV EQYSNYSVNG EPVNGRHTLG ENIADNGGLK 660
  661 AAYRAYQNWV KKNGAEETLP TLGLTNNQLF FLGFAQVWCS VRTPESSHEG LITDPHSPSR 720
  721 FRVIGSLSNS KEFSEHFQCP PGSPMNPRHK CEVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle