YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84939, gi\|157...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKPSIICLF LGILAKSSAG QFYFPNEAAQ VPNYGRCITP NRERALCIHL EDCKYLYGLL  60
   61 TTTPLRDTDR LYLSRSQCGY TNGKVLICCP DRYRESSSET TPPPKPNVTS NSLLPLPGQC 120
  121 GNILSNRIYG GMKTKIDEFP WMALIEYTKS QGKKGHHCGG SLISTRYVIT ASHCVNGKAL 180
  181 PTDWRLSGVR LGEWDTNTNP DCEVDVRGMK DCAPPHLDVP VERTIPHPDY IPASKNQVND 240
  241 IALLRLAQQV EYTDFVRPIC LPLDVNLRSA TFDGITMDVA GWGKTEQLSA SNLKLKAAVE 300
  301 GSRMDECQNV YSSQDILLED TQMCAGGKEG VDSCRGDSGG PLIGLDTNKV NTYYFLAGVV 360
  361 SFGPTPCGLA GWPGVYTLVG KYVDWIQNTI ES

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	392	0.99