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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EAE_CITFR
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIHGFCTGT RHKHKLRKTF IMLGAGLGLF FSVNQNSFAN GENYFKLRAD SKLINNNIAQ  60
   61 DRLFYTLKTG ESVAQLSKSQ GISVPVIWSL NKHLYSSESE MMKASPGQQI ILPLKKLSAE 120
  121 YSTLPILGTA PVVAAADVAG HTKKMSQDTT KSNTSDDKAL NYAAQQAASL GSQLQSRSLN 180
  181 GDYAKDTALS MAGNQASSQM QAWLQHYGTA EVNLQSGNNF DGSSLDFLLP FYDTENMLAF 240
  241 GQVGARYIDS RFTANLGAGQ RFFLPENMLG YNVFIDQDFS GNNTRLGIGG EYWRDYFKSS 300
  301 VNGYFRMSGW HESYNKKDYD ERPANGFDIR FNGYLPSYPA LGGKLMYEQY YGDNVALFNA 360
  361 DKLYSNPGAV TVGVNYTPIP LVTMGIDYRH GTGNENDLLY SMQFHYQFDK PWSQQIEPQY 420
  421 VNELRTLSGS RYDLVQRNNN IILDYKKQDI LSMNIPHNIN GTEHSTHKIQ LIVKSKYGLE 480
  481 RIVWDDSTLR TQGGQIQHSE RKAHNDYQAI LPAYVQGGSN VYKVTRRAYD RNGNSSNNVQ 540
  541 LTITVLSNGQ VVDKVGITNF TADKTSAKAD NSDTITYTAT VKKNGVAQAN VPVSFNIVSG 600
  601 TATLSAKSAN TNSSGKATVT LKSDKPGQVV VSAKTAEMTS ALNANAVIFV DQTKASITEI 660
  661 KVDKTIATAD NKDTIEYTVK VMKGGNPISG QKVTFSKDFG TLNKTEATTD QNGYATVKLS 720
  721 SGTPGKAIVS AKVSEVNTEV KAATVEFFAP LSIDGNKVTV IGTGVTGSLP KNWLQYGQVK 780
  781 LQATGGNGKY TWKSSNTKIA SVDNSGVITL NEKGSATITV VSGDNQSATY TINTPDNIII 840
  841 AVDKINRMAY SEAESRCQAI SSNLAQSKSV LENIYSKWGA ANKYPYYSSS NSLTAWIKQS 900
  901 TSDSASGVSN TYDLVTTNSL TNVKATDKNA FAVCVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle