YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EFNA5_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQAEMIVFV GVILWMCVFS QEPSSKVMAD RYAVFWNRTN PRFQRGDYHI DVCINDYLDV  60
   61 YCPHYEDSVP EERTERYVLY MVNYDGYSTC DHTAKGFKRW ECNRPHSPNG PLKFSEKFQL 120
  121 FTPFSLGFEF RPGREYYYIS SMITETGRRS CLKLKVFVRP PNGCEKTIGV HDRVFVDDKV 180
  181 DNALEPRDDT SHEAEPSRSD VSTSGLRHQT SRPLLALLLL CISLYLLL

Type	Start	End	Confidence
Signal Peptide	1	29	0.81
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	228	0.96