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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157426949, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASARLLLAR GCTGVKSSFT GHGQRSLSVS SAVLARTHVS YEVKDNVAVV RINDPTSKVN  60
   61 TLSKHMQAEM VEVMNEVWGN SSVKSAVLIS RKPGCFIAGA DINMIQACTT AEEVTSLSQA 120
  121 GQKMFEQIEK SPIPIVAAIN GSCLGGGLEF AIACQYRIAT KSKKTVLGTP EVMLGLLPGA 180
  181 GGTQRLPKMV GLPAAFDMML TGRNIRADKA KKMGLVHQLV DPLGPGLKSP EERTIEYLEE 240
  241 VAVDFAKGLA AKKVTLEKKK GLMQKVQDFV MGLSLVRQQI YKTVHGKVMK QSKGLYPAPL 300
  301 KIIECIQTGI EKGNAAGYLA EAQNFGQLAM SSESRALIGL YHGQVACKKN HFGKPEREVK 360
  361 NLAILGAGLM GAGIAQVTID KGVATILKDT TLEGLARGEQ QVYKGLNDKT KKKSLTTFER 420
  421 DGIMSKLSGQ LDYHGFEKAD MVIEAVFEDL AIKHKVLKEV EAVIPPHCIF ATNTSALPIK 480
  481 DIAAASKRPE KVIGMHYFSP VDKMQLLEII TTDKTSKDTT ASAVAIGLKQ GKLIVVVGDG 540
  541 PGFYTTRCLA PMLAEAVRIL QEGVGPKKLD SLTTGFGFPV GLATLADEVG IDVAAHVAED 600
  601 LGKAFGARFG GGNVDFLKTM VQKGFKGRKS GKGCYVYGAK SKEKKVNSEA EEILKSFKLT 660
  661 APPAVSSDED IQYRLVSRFV NEAVLCLQEG ILADPIQGDI GAVFGLGFPP CLGGPFRFVD 720
  721 SYGADKLIQK MKRFEEVYGN QFSPCQLLLD HAKNTSKRFH K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle