YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	E13B_PEA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFFARTRR FSLVSLFLLE LFTINLIPTT DAQIGICYGM MGNNLPPANE VIALYKANNI  60
   61 KRMRLYDPNQ PALNALRDSG IELILGIPNS DLQTLATNQD SARQWVQRNV LNFYPSVKIK 120
  121 YIAVGNEVSP VGGSSWLAQY VLPATQNVYQ AIRAQGLHDQ IKVTTAIDMT LIGNSFPPSK 180
  181 GSFRSDVRSY LDPFIGYLVY AGAPLLVNVY PYFSHIGNPR DISLPYALFT SPGVMVQDGP 240
  241 NGYQNLFDAM LDSVHAALDN TGIGWVNVVV SESGWPSDGG SATSYDNARI YLDNLIRHVG 300
  301 KGTPRRPWAT EAYLFAMFDE NQKSPELEKH FGVFYPNKQK KYPFGFGGER RDGEIVEGDF 360
  361 NGTVSLKSDM

Type	Start	End	Confidence
Signal Peptide	1	32	0.97
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	370	0.98