YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149292346, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQFLNRCSR GRGAWLLMAL TAFLLELTAL YFQHIMLLQP CVMCIYERVA LFGILGASLL  60
   61 GAIAPRSPLR YLAIAVWIYS AWKGVQLAWA HTMLQLNPSP FNTCDFFVNF PSWLPLDKWL 120
  121 PAVFAASGDC SERQWQFMSL EMPQWLVGIF AAYLVIAVLV LISQFVKPKR RDLFGR

Type	Start	End	Confidence
Cytoplasmic	1	12	0.95
Transmembrane Helix	13	35	0.90
Non-Cytoplasmic	36	43	0.81
Transmembrane Helix	44	64	0.91
Cytoplasmic	65	70	0.83
Transmembrane Helix	71	92	0.85
Non-Cytoplasmic	93	144	0.95
Transmembrane Helix	145	166	0.94
Cytoplasmic	167	176	0.96