YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194409883, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFLNQCSR GRGAWLLMAF TALALEMVAL WFQHVMLLKP CVLCIYERCA LFGVMGAGLV  60
   61 GAIAPKTPLR YVAMVIWIYS AWRGLQLAYE HTMIQLHPSP FMTCDFMARF PDWLPLGKWL 120
  121 PQVFVASGDC AERQWSFLTL EMPQWLLGIF AAYLVVAIAV VIAQAFKPKK RDLFGR

Type	Start	End	Confidence
Cytoplasmic	1	12	0.88
Transmembrane Helix	13	35	0.89
Non-Cytoplasmic	36	43	0.75
Transmembrane Helix	44	64	0.87
Cytoplasmic	65	70	0.67
Transmembrane Helix	71	89	0.71
Non-Cytoplasmic	90	144	0.87
Transmembrane Helix	145	166	0.94
Cytoplasmic	167	176	0.94