YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15830934, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFLNQCSQ GRGAWLLMAF TALALELTAL WFQHVMLLKP CVLCIYERCA LFGVLGAALI  60
   61 GAIAPKTPLR YVAMVIWLYS AFRGVQLTYE HTMLQLYPSP FATCDFMVRF PEWLPLDKWV 120
  121 PQVFVASGDC AERQWDFLGL EMPQWLLGIF IAYLIVAVLV VISQPFKAKK RDLFGR

Type	Start	End	Confidence
Cytoplasmic	1	12	0.74
Transmembrane Helix	13	35	0.89
Non-Cytoplasmic	36	43	0.62
Transmembrane Helix	44	64	0.89
Cytoplasmic	65	70	0.60
Transmembrane Helix	71	89	0.67
Non-Cytoplasmic	90	144	0.93
Transmembrane Helix	145	166	0.91
Cytoplasmic	167	176	0.95