YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1657787\|gb\|AA...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAFDADLRS LAAQTTLSRR TVIATSLATG FALAVQPVAA QTTIATDANG LIAGEVKIPM  60
   61 QDGVIPAYRA MPAEGGPFPT ILVVQEIFGV HEHIKDVCRR LAKLGYFALA PELYARQGDV 120
  121 STLTDIQQIV SEVVSKVPDD QVMSDLDAAV AFAKGTGKAD TARLGITGFC WGGRITWLYA 180
  181 AHNPAVKAGV AWYGRLVGDS SALMPKNPVD VAADLKAPVL GLYGGADQGI PVATIDRMKE 240
  241 ACRAAGKTCD FVVYPEAGHA FHADYRPSYR AEPAQDGWKR LQDWFRQYGV A

Type	Start	End	Confidence
Signal Peptide	1	40	0.96
N-region	1	31
H-region	32	37
C-region	38	40
Cleavage Site	40	41
Non-Cytoplasmic	41	291	0.99