YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DHSD_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLLKLGVL CSGQGARALS LRSRAVRPAF VSAFLQDQPT PGWRGTQHIH LSPSHQSGSK  60
   61 AASLHWTSER VVSVLLLGLI PAGYLNPCSV VDYSLAAALT LHSHWGIGQV VTDYVHGDAL 120
  121 QKATKAGLLA VSALTFAGLC YFNYHDVGIC RAVAMLWKL

Type	Start	End	Confidence
Signal Peptide	1	18	0.72
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	159	0.80