YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DHSD_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSNASALGR NGVHDFILVR ATAIVLTLYI IYMVGFFATS GELTYEVWIG FFASAFTKVF  60
   61 TLLALFSILI HAWIGMWQVL TDYVKPLALR LMLQLVIVVA LVVYVIYGFV VVWGV

Type	Start	End	Confidence
Cytoplasmic	1	15	0.95
Transmembrane Helix	16	38	0.91
Non-Cytoplasmic	39	53	0.76
Transmembrane Helix	54	75	0.87
Cytoplasmic	76	90	0.76
Transmembrane Helix	91	111	0.93
Non-Cytoplasmic	112	115	0.78