YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29142556, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRNVKKQRP VNLDLQTIRF PITAIASILH RVSGVITFIA VGILLWLLGT SLSSPEGFQQ  60
   61 AADIMDGFIV KFIMWGILTA LAYHVIVGIR HMLMDFGYLE ETFEAGQRSA KISFVITVVL 120
  121 SLLAGVLVW

Type	Start	End	Confidence
Cytoplasmic	1	27	0.92
Transmembrane Helix	28	49	0.91
Non-Cytoplasmic	50	67	0.90
Transmembrane Helix	68	89	0.89
Cytoplasmic	90	108	0.88
Transmembrane Helix	109	128	0.91
Non-Cytoplasmic	129	129	0.95