YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DHSC_COXBU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAKRPVNLD LTKFHFPPMA ILSIGHRISG FVLFLCMPLM FYLLHRATAS AESFYHLHQL  60
   61 LLHNGWIKLA VWIMLSATLF HLFAGIRHLA MDLGFWESVP EGRISAYTVF VVSFIAIVLA 120
  121 GVWIW

Type	Start	End	Confidence
Cytoplasmic	1	22	0.63
Transmembrane Helix	23	45	0.88
Non-Cytoplasmic	46	64	0.61
Transmembrane Helix	65	85	0.91
Cytoplasmic	86	103	0.58
Transmembrane Helix	104	124	0.95
Non-Cytoplasmic	125	125	0.67