YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DDL_SHEON
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKINLLLLC GGGSAEHDIS LLSANYFETS LAKSEQFNVL RVVLDKFGQY QTAAGDDCEL  60
   61 TNNREIRFRD ESKAPWPVDY VIPCIHGYPG ETGDIQSYFN LIQLPYFGCE SEASSNCFNK 120
  121 ITAKMWFSAL GIPNTPYIFL NQYDDEAIAQ TQAALEKWGS IFVKAASQGS SVGCYKVDEA 180
  181 SKVLGVLKDA FGYAPYVIVE KTIKARELEV AVYEYQGEVI ATLPGEIICD SNTFYTFDEK 240
  241 YAKSSKARTD VVAQNVPTDI SDQIRAYAIK AFKGMKLRHL SRIDFFLTAD NEILLNEINT 300
  301 FPGSTPISMF PKMLQNHGHD FTQYLSLVIN SQLAAK

Type	Start	End	Confidence
Signal Peptide	1	15	0.95
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	336	0.99