YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DD31_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHNNNPGTP QMSSEFPAST TQTSSSAAAY DNSSHFEKEQ SLMRWEQDLK LRERALANNQ  60
   61 SAADITGPHV VVPAPATAHP RQANFPSSYP MIRLNLEEDI AIREYRQIVK FGIFVFLWEA 120
  121 AALVYNWVVS IGTIVYSAVD NFFLALFYMI VGVPTLYFLT RKLYRAASVP ERARKSYAYL 180
  181 MALLGVVLFN IIFFVGFKRS GMNGLIWVIS LFHNDHNAVG AMATVSLFFW FVGVFLTIAL 240
  241 FIMYLRLNNT KRQRGEIQNA GFREYIKSR

Type	Start	End	Confidence
Cytoplasmic	1	110	0.99
Transmembrane Helix	111	131	0.90
Non-Cytoplasmic	132	141	0.65
Transmembrane Helix	142	160	0.94
Cytoplasmic	161	176	0.91
Transmembrane Helix	177	197	0.95
Non-Cytoplasmic	198	220	0.92
Transmembrane Helix	221	245	0.88
Cytoplasmic	246	269	0.97